Interface ProteinModification

  • All Known Implementing Classes:
    ProteinModificationImpl

    public interface ProteinModification
    This interface defines information about a specific protein modification.
    Since:
    3.0
    Author:
    Jianjiong Gao
    • Method Detail

      • getId

        java.lang.String getId()
        Returns:
        modification id.
      • getPdbccId

        java.lang.String getPdbccId()
        Returns:
        Protein Data Bank Chemical Component ID.
      • getPdbccName

        java.lang.String getPdbccName()
        Returns:
        Protein Data Bank Chemical Component name.
      • getResidId

        java.lang.String getResidId()
        Returns:
        RESID ID.
      • getResidName

        java.lang.String getResidName()
        Returns:
        RESID name.
      • getPsimodId

        java.lang.String getPsimodId()
        Returns:
        PSI-MOD ID.
      • getPsimodName

        java.lang.String getPsimodName()
        Returns:
        PSI-MOD name.
      • getSystematicName

        java.lang.String getSystematicName()
        Returns:
        Systematic name.
      • getDescription

        java.lang.String getDescription()
        Returns:
        Description.
      • getKeywords

        java.util.Set<java.lang.String> getKeywords()
        Returns:
        a set of keywords.
      • getFormula

        java.lang.String getFormula()
        Returns:
        formula of the modified residue.