Class FractionalSimilarityScorer<S extends Sequence<C>,​C extends Compound>

    • Constructor Detail

      • FractionalSimilarityScorer

        public FractionalSimilarityScorer​(PairwiseSequenceAligner<S,​C> aligner)
        Creates a fractional similarity scorer for a pair of sequences aligned by the given pairwise sequence aligner.
        Parameters:
        aligner - a pairwise sequence aligner
      • FractionalSimilarityScorer

        public FractionalSimilarityScorer​(SequencePair<S,​C> pair)
        Creates a fractional similarity scorer for an aligned pair of sequences.
        Parameters:
        pair - an aligned pair of sequences